Package: tram 1.4-3

Torsten Hothorn

tram: Transformation Models

Formula-based user-interfaces to specific transformation models implemented in package 'mlt' (<doi:10.32614/CRAN.package.mlt>, <doi:10.32614/CRAN.package.mlt.docreg>). Available models include Cox models, some parametric survival models (Weibull, etc.), models for ordered categorical variables, normal and non-normal (Box-Cox type) linear models, and continuous outcome logistic regression (Lohse et al., 2017, <doi:10.12688/f1000research.12934.1>). The underlying theory is described in Hothorn et al. (2018) <doi:10.1111/sjos.12291>. An extension to transformation models for clustered data is provided (Barbanti and Hothorn, 2022, <doi:10.1093/biostatistics/kxac048>) and a tutorial explains applications in survival analysis (Siegfried et al., 2025, <doi:10.48550/arXiv.2402.06428>). Multivariate conditional transformation models (Klein et al, 2022, <doi:10.1111/sjos.12501>) and shift-scale transformation models (Siegfried et al, 2023, <doi:10.1080/00031305.2023.2203177>) can be fitted as well. The package contains an implementation of a doubly robust score test, described in Kook et al. (2024, <doi:10.1080/01621459.2024.2395588>).

Authors:Torsten Hothorn [aut, cre], Luisa Barbanti [ctb], Sandra Siegfried [aut], Lucas Kook [aut], Susanne Dandl [ctb], Brian Ripley [ctb], Bill Venables [ctb], Douglas M. Bates [ctb], Nadja Klein [ctb]

tram_1.4-3.tar.gz
tram_1.4-3.zip(r-4.7)tram_1.4-3.zip(r-4.6)tram_1.4-3.zip(r-4.5)
tram_1.4-3.tgz(r-4.6-any)tram_1.4-3.tgz(r-4.5-any)
tram_1.4-3.tar.gz(r-4.7-any)tram_1.4-3.tar.gz(r-4.6-any)
tram_1.4-3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
tram/json (API)
NEWS

# Install 'tram' in R:
install.packages('tram', repos = c('https://trafo-universe.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://codeberg.org/thothorn/tram

On CRAN:

Conda:

7.10 score 6 packages 165 scripts 3.9k downloads 1 mentions 21 exports 30 dependencies

Last updated from:e521db8c15. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK399
source / vignettesOK906
linux-release-x86_64OK402
macos-release-arm64OK247
macos-oldrel-arm64OK267
windows-develOK400
windows-releaseOK355
windows-oldrelOK356
wasm-releaseOK172

Exports:AaregBoxCoxColrComprisCoxphL1LehmannLmMmltmtramOVLperm_testPIPolrrobust_score_testROCscore_testSurvregtramtram_dataTV

Dependencies:alabamabasefunBBcodacodetoolsconeprojforeachFormulaicenRegiteratorslatticeMASSMatrixMLEcensmltmultcompmvtnormnloptrnumDerivorthopolynompolynomquadprogRcppRcppArmadilloRcppEigensandwichsurvivalTH.datavariableszoo

Applications of Nonparanormal Adjusted Marginal Inference

Rendered fromNAMI.Rnwusingknitr::knitron Jun 10 2026.

Last update: 2026-06-03
Started: 2025-06-05

Marginally Interpretable Linear Transformation Models

Rendered frommtram.Rnwusingknitr::knitron Jun 10 2026.

Last update: 2026-06-03
Started: 2019-09-19

Smooth Transformation Models for Survival Analysis: A Tutorial Using R

Rendered fromsurvtram.Rnwusingknitr::knitron Jun 10 2026.

Last update: 2026-06-03
Started: 2025-09-17

Transformation Models: The tram Package

Rendered fromtram.Rnwusingknitr::knitron Jun 10 2026.

Last update: 2026-06-03
Started: 2017-12-17

Readme and manuals

Help Manual

Help pageTopics
Aalen Additive Hazards ModelAareg
(Similar to) Box-Cox ModelsBoxCox
Continuous Outcome Logistic RegressionColr
Competing Risk RegressionCompris
Cox Proportional Hazards ModelCoxph
Proportional Reverse Time Hazards Linear RegressionLehmann
Normal Linear ModelLm
Multivariate Conditional Transformation ModelsMmlt
Transformation Models for Clustered Datamtram
Permutation Transformation Testsperm_test perm_test.tram
Ordered Categorical RegressionPolr
Doubly Robust Transformation Score Testrobust_score_test robust_score_test.tram
Transformation Score Tests and Confidence Intervalsscore_test score_test.tram
Parametric Survival ModelsSurvreg
Stratified Linear Transformation Modelstram tram_data
Methods for Stratified Linear Transformation Modelsas.mlt.tram coef.Lm coef.Survreg coef.tram estfun.tram L1 L1.default L1.tram logLik.tram model.frame.tram model.matrix.stram model.matrix.tram OVL OVL.default OVL.tram PI PI.default PI.tram plot.ROCtram plot.tram predict.stram predict.tram residuals.tram ROC ROC.default ROC.tram TV TV.default TV.tram vcov.tram